Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr2e3Q9QXZ7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Gm6433-201ENSMUST00000118634 875 ntBASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nr2e3Q9QXZ7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Gm27000-201ENSMUST00000182943 842 ntBASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr2e3Q9QXZ7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Gm7370-201ENSMUST00000219471 767 ntBASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr2e3Q9QXZ7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Gm9987-201ENSMUST00000069768 567 ntBASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nr2e3Q9QXZ7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Mir7071-201ENSMUST00000184847 69 ntBASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms