Protein–RNA interactions for Protein: Q9JM96

Cdc42ep4, Cdc42 effector protein 4, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep4Q9JM96 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdc42ep4Q9JM96 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdc42ep4Q9JM96 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Gm7461-201ENSMUST00000058918 827 ntBASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdc42ep4Q9JM96 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Gm13401-201ENSMUST00000117074 291 ntBASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdc42ep4Q9JM96 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdc42ep4Q9JM96 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdc42ep4Q9JM96 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdc42ep4Q9JM96 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.71■□□□□ 0.59
Cdc42ep4Q9JM96 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdc42ep4Q9JM96 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Cdc42ep4Q9JM96 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdc42ep4Q9JM96 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdc42ep4Q9JM96 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdc42ep4Q9JM96 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdc42ep4Q9JM96 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms