Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Gm18032-201ENSMUST00000222541 538 ntBASIC18.06■□□□□ 0.48
Rfx5Q9JL61 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx5Q9JL61 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.06■□□□□ 0.48
Rfx5Q9JL61 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rfx5Q9JL61 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Gm7213-201ENSMUST00000215977 950 ntBASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx5Q9JL61 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Actl10-202ENSMUST00000226583 1501 ntBASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx5Q9JL61 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx5Q9JL61 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rfx5Q9JL61 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx5Q9JL61 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx5Q9JL61 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Rfx5Q9JL61 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Rfx5Q9JL61 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms