Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.64■□□□□ 0.42
Scn5aQ9JJV9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scn5aQ9JJV9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Scn5aQ9JJV9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm5867-201ENSMUST00000063197 592 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44357-201ENSMUST00000195897 142 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm19658-201ENSMUST00000196231 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44367-201ENSMUST00000196836 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44350-201ENSMUST00000197197 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44390-201ENSMUST00000197533 144 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44313-201ENSMUST00000198018 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44486-201ENSMUST00000198508 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44454-201ENSMUST00000198541 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44314-201ENSMUST00000199263 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44394-201ENSMUST00000199558 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44484-201ENSMUST00000199873 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44466-201ENSMUST00000200264 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Gm44359-201ENSMUST00000200671 138 ntBASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn5aQ9JJV9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Gm27867-201ENSMUST00000184778 125 ntBASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scn5aQ9JJV9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn5aQ9JJV9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn5aQ9JJV9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms