Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl28Q9JIL2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl28Q9JIL2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl28Q9JIL2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl28Q9JIL2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccl28Q9JIL2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl28Q9JIL2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl28Q9JIL2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccl28Q9JIL2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl28Q9JIL2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl28Q9JIL2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccl28Q9JIL2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Ccl28Q9JIL2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccl28Q9JIL2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccl28Q9JIL2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Ccl28Q9JIL2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Ccl28Q9JIL2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Gm11643-201ENSMUST00000119578 864 ntBASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl28Q9JIL2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Gm11249-201ENSMUST00000117071 859 ntBASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Gm6576-201ENSMUST00000169678 883 ntBASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl28Q9JIL2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl28Q9JIL2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms