Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup50Q9JIH2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup50Q9JIH2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Gm37025-201ENSMUST00000195159 829 ntBASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nup50Q9JIH2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nup50Q9JIH2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nup50Q9JIH2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Nup50Q9JIH2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nup50Q9JIH2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Nup50Q9JIH2 Gm15378-201ENSMUST00000121894 207 ntBASIC18.02■□□□□ 0.48
Nup50Q9JIH2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nup50Q9JIH2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nup50Q9JIH2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nup50Q9JIH2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nup50Q9JIH2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nup50Q9JIH2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nup50Q9JIH2 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.02■□□□□ 0.47
Nup50Q9JIH2 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.02■□□□□ 0.47
Nup50Q9JIH2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Nup50Q9JIH2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nup50Q9JIH2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nup50Q9JIH2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms