Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Rab3c-203ENSMUST00000224180 967 ntBASIC15.66■□□□□ 0.1
ClpxQ9JHS4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpxQ9JHS4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpxQ9JHS4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
ClpxQ9JHS4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ClpxQ9JHS4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Gm26524-201ENSMUST00000192339 390 ntBASIC15.63■□□□□ 0.09
ClpxQ9JHS4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.63■□□□□ 0.09
ClpxQ9JHS4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms