Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4bQ9ES00 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4bQ9ES00 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Ube4bQ9ES00 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4bQ9ES00 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4bQ9ES00 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4bQ9ES00 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4bQ9ES00 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4bQ9ES00 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4bQ9ES00 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ube4bQ9ES00 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ube4bQ9ES00 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Ube4bQ9ES00 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Gm38205-201ENSMUST00000192243 258 ntBASIC16.46■□□□□ 0.23
Ube4bQ9ES00 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4bQ9ES00 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.46■□□□□ 0.22
Ube4bQ9ES00 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms