Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ripk4Q9ERK0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ripk4Q9ERK0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ripk4Q9ERK0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ripk4Q9ERK0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ripk4Q9ERK0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ripk4Q9ERK0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Il3ra-202ENSMUST00000223589 738 ntBASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ripk4Q9ERK0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ripk4Q9ERK0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Gm7370-201ENSMUST00000219471 767 ntBASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Gm21559-201ENSMUST00000220638 855 ntBASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Gm8587-201ENSMUST00000076538 843 ntBASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ripk4Q9ERK0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Mir1668-201ENSMUST00000184114 107 ntBASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ripk4Q9ERK0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms