Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps35Q9EQH3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Gm5417-201ENSMUST00000079706 384 ntBASIC17.1■□□□□ 0.33
Vps35Q9EQH3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps35Q9EQH3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.09■□□□□ 0.33
Vps35Q9EQH3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.09■□□□□ 0.33
Vps35Q9EQH3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps35Q9EQH3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps35Q9EQH3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Vps35Q9EQH3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps35Q9EQH3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Mir6982-201ENSMUST00000184354 68 ntBASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps35Q9EQH3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms