Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 Gm26571-201ENSMUST00000181399 666 ntBASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.62■□□□□ 0.25
Sh2d4aQ9D7V1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Haglr-201ENSMUST00000100000 2085 ntBASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d4aQ9D7V1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Gm26524-201ENSMUST00000192339 390 ntBASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.6■□□□□ 0.25
Sh2d4aQ9D7V1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Mir2861-201ENSMUST00000175539 82 ntBASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Flg-201ENSMUST00000050758 1488 ntBASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.59■□□□□ 0.25
Sh2d4aQ9D7V1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sh2d4aQ9D7V1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh2d4aQ9D7V1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh2d4aQ9D7V1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh2d4aQ9D7V1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Gm18284-201ENSMUST00000172604 624 ntBASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d4aQ9D7V1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d4aQ9D7V1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh2d4aQ9D7V1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sh2d4aQ9D7V1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh2d4aQ9D7V1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Sh2d4aQ9D7V1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms