Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap3Q9D706 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap3Q9D706 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap3Q9D706 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap3Q9D706 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap3Q9D706 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap3Q9D706 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Gm11950-201ENSMUST00000121615 838 ntBASIC18.83■□□□□ 0.6
Rpap3Q9D706 Gm27704-201ENSMUST00000185094 107 ntBASIC18.83■□□□□ 0.6
Rpap3Q9D706 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.83■□□□□ 0.6
Rpap3Q9D706 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap3Q9D706 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.82■□□□□ 0.6
Rpap3Q9D706 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rpap3Q9D706 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap3Q9D706 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.81■□□□□ 0.6
Rpap3Q9D706 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap3Q9D706 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Mir770-201ENSMUST00000103252 94 ntBASIC18.8■□□□□ 0.6
Rpap3Q9D706 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Gm13186-201ENSMUST00000118031 316 ntBASIC18.8■□□□□ 0.6
Rpap3Q9D706 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rpap3Q9D706 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.8■□□□□ 0.6
Rpap3Q9D706 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Gm6623-201ENSMUST00000173570 544 ntBASIC18.79■□□□□ 0.6
Rpap3Q9D706 Ank2-226ENSMUST00000189368 339 ntBASIC18.79■□□□□ 0.6
Rpap3Q9D706 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.79■□□□□ 0.6
Rpap3Q9D706 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap3Q9D706 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms