Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl8cQ9D6I0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl8cQ9D6I0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl8cQ9D6I0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl8cQ9D6I0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Gm13168-201ENSMUST00000121771 632 ntBASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Gm10698-201ENSMUST00000182663 604 ntBASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtl8cQ9D6I0 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtl8cQ9D6I0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtl8cQ9D6I0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl8cQ9D6I0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl8cQ9D6I0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rtl8cQ9D6I0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl8cQ9D6I0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl8cQ9D6I0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl8cQ9D6I0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.27■□□□□ 0.04
Rtl8cQ9D6I0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.27■□□□□ 0.04
Rtl8cQ9D6I0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl8cQ9D6I0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.27■□□□□ 0.03
Rtl8cQ9D6I0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rtl8cQ9D6I0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl8cQ9D6I0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl8cQ9D6I0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl8cQ9D6I0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl8cQ9D6I0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms