Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc3Q9CWU5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc3Q9CWU5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc3Q9CWU5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Khdc3Q9CWU5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Khdc3Q9CWU5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Gm22240-201ENSMUST00000175225 82 ntBASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Khdc3Q9CWU5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms