Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm7Q9CQQ8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Gm21559-201ENSMUST00000220638 855 ntBASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Gm8587-201ENSMUST00000076538 843 ntBASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm7Q9CQQ8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Gm8969-201ENSMUST00000199694 526 ntBASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm7Q9CQQ8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Gm25016-201ENSMUST00000158399 131 ntBASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Lsm7Q9CQQ8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Lsm7Q9CQQ8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Lsm7Q9CQQ8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms