Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Idnk-204ENSMUST00000226010 1898 ntBASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf8Q99PV0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf8Q99PV0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Gm37722-201ENSMUST00000193757 208 ntBASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Prpf8Q99PV0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Mzt1-203ENSMUST00000227948 952 ntBASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Gm27357-201ENSMUST00000183754 135 ntBASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Prpf8Q99PV0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Prpf8Q99PV0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms