Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim11Q99PQ2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim11Q99PQ2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim11Q99PQ2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim11Q99PQ2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim11Q99PQ2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim11Q99PQ2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trim11Q99PQ2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim11Q99PQ2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.46■□□□□ 0.71
Trim11Q99PQ2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim11Q99PQ2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Gm37025-201ENSMUST00000195159 829 ntBASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim11Q99PQ2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Trim11Q99PQ2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Gm17661-201ENSMUST00000170317 270 ntBASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim11Q99PQ2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms