Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim8Q99PJ2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Gm11927-201ENSMUST00000118472 759 ntBASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Flg-201ENSMUST00000050758 1488 ntBASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trim8Q99PJ2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim8Q99PJ2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim8Q99PJ2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim8Q99PJ2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim8Q99PJ2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim8Q99PJ2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim8Q99PJ2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim8Q99PJ2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim8Q99PJ2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim8Q99PJ2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim8Q99PJ2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim8Q99PJ2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim8Q99PJ2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim8Q99PJ2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim8Q99PJ2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Gm12933-201ENSMUST00000120203 872 ntBASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim8Q99PJ2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim8Q99PJ2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim8Q99PJ2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms