Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf2ird2Q99NI3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.58■□□□□ 0.41
Gtf2ird2Q99NI3 Gm13474-201ENSMUST00000122466 815 ntBASIC17.58■□□□□ 0.4
Gtf2ird2Q99NI3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Gtf2ird2Q99NI3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.58■□□□□ 0.4
Gtf2ird2Q99NI3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf2ird2Q99NI3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf2ird2Q99NI3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf2ird2Q99NI3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Mir5130-201ENSMUST00000175160 84 ntBASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Gm7977-201ENSMUST00000193787 748 ntBASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf2ird2Q99NI3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf2ird2Q99NI3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf2ird2Q99NI3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms