Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh4Q99MT2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Msh4Q99MT2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Gm11643-201ENSMUST00000119578 864 ntBASIC16.67■□□□□ 0.26
Msh4Q99MT2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.67■□□□□ 0.26
Msh4Q99MT2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh4Q99MT2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.66■□□□□ 0.26
Msh4Q99MT2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.66■□□□□ 0.26
Msh4Q99MT2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.66■□□□□ 0.26
Msh4Q99MT2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.66■□□□□ 0.26
Msh4Q99MT2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh4Q99MT2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Mir7071-201ENSMUST00000184847 69 ntBASIC16.65■□□□□ 0.26
Msh4Q99MT2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.65■□□□□ 0.26
Msh4Q99MT2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh4Q99MT2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Msh4Q99MT2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Msh4Q99MT2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh4Q99MT2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms