Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Psmb5-202ENSMUST00000227257 622 ntBASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col25a1Q99MQ5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Mir2861-201ENSMUST00000175539 82 ntBASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col25a1Q99MQ5 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Gm10060-201ENSMUST00000212002 111 ntBASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col25a1Q99MQ5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Col25a1Q99MQ5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.67■□□□□ 0.42
Col25a1Q99MQ5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms