Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hps4Q99KG7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hps4Q99KG7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hps4Q99KG7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hps4Q99KG7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hps4Q99KG7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps4Q99KG7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.07■□□□□ 0.8
Hps4Q99KG7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Gm45328-201ENSMUST00000210942 917 ntBASIC20.07■□□□□ 0.8
Hps4Q99KG7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps4Q99KG7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps4Q99KG7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hps4Q99KG7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Hps4Q99KG7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.05■□□□□ 0.8
Hps4Q99KG7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.05■□□□□ 0.8
Hps4Q99KG7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hps4Q99KG7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Mir3081-201ENSMUST00000175305 84 ntBASIC20.04■□□□□ 0.8
Hps4Q99KG7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps4Q99KG7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Gm11336-201ENSMUST00000118168 334 ntBASIC20.03■□□□□ 0.8
Hps4Q99KG7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps4Q99KG7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hps4Q99KG7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hps4Q99KG7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms