Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Thumpd1Q99J36 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Thumpd1Q99J36 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd1Q99J36 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd1Q99J36 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd1Q99J36 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd1Q99J36 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd1Q99J36 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.26■□□□□ 0.03
Thumpd1Q99J36 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Mir6349-201ENSMUST00000184059 97 ntBASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd1Q99J36 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Dancr-204ENSMUST00000132389 2347 ntBASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd1Q99J36 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Gm6211-202ENSMUST00000167849 925 ntBASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd1Q99J36 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms