Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha11Q91Y19 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha11Q91Y19 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdha11Q91Y19 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdha11Q91Y19 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdha11Q91Y19 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha11Q91Y19 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Gm18101-201ENSMUST00000215769 548 ntBASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha11Q91Y19 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms