Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Gm18032-201ENSMUST00000222541 538 ntBASIC18.22■□□□□ 0.51
Pcdha2Q91Y17 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha2Q91Y17 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdha2Q91Y17 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha2Q91Y17 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha2Q91Y17 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdha2Q91Y17 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha2Q91Y17 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Gm7213-201ENSMUST00000215977 950 ntBASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha2Q91Y17 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdha2Q91Y17 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Actl10-202ENSMUST00000226583 1501 ntBASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Mir1668-201ENSMUST00000184114 107 ntBASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Gm10566-201ENSMUST00000086739 996 ntBASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pcdha2Q91Y17 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha2Q91Y17 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Gm7977-201ENSMUST00000193787 748 ntBASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha2Q91Y17 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha2Q91Y17 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms