Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha8Q91Y12 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha8Q91Y12 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdha8Q91Y12 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.64■□□□□ 0.26
Pcdha8Q91Y12 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdha8Q91Y12 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha8Q91Y12 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Gm22240-201ENSMUST00000175225 82 ntBASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha8Q91Y12 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha8Q91Y12 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms