Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb1Q91Y08 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb1Q91Y08 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb1Q91Y08 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb1Q91Y08 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhb1Q91Y08 Odf3b-204ENSMUST00000227834 930 ntBASIC17.77■□□□□ 0.44
Pcdhb1Q91Y08 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb1Q91Y08 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb1Q91Y08 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb1Q91Y08 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb1Q91Y08 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb1Q91Y08 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb1Q91Y08 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb1Q91Y08 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Il3ra-202ENSMUST00000223589 738 ntBASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb1Q91Y08 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb1Q91Y08 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms