Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb18Q91Y02 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Gm26039-201ENSMUST00000158152 144 ntBASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Gm17808-201ENSMUST00000200859 894 ntBASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhb18Q91Y02 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb18Q91Y02 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb18Q91Y02 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb18Q91Y02 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb18Q91Y02 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb18Q91Y02 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb18Q91Y02 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb18Q91Y02 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb18Q91Y02 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb18Q91Y02 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Pcdhb18Q91Y02 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb18Q91Y02 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb18Q91Y02 Gm17807-201ENSMUST00000186869 298 ntBASIC17.83■□□□□ 0.44
Pcdhb18Q91Y02 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb18Q91Y02 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb18Q91Y02 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb18Q91Y02 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb18Q91Y02 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb18Q91Y02 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb18Q91Y02 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms