Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb20Q91XZ9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 AC132446.1-201ENSMUST00000222655 226 ntBASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.49■□□□□ 0.23
Pcdhb20Q91XZ9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Gm7977-201ENSMUST00000193787 748 ntBASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb20Q91XZ9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Gm15626-201ENSMUST00000117478 868 ntBASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb20Q91XZ9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms