Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Gm11336-201ENSMUST00000118168 334 ntBASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb5Q91XZ5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhb5Q91XZ5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhb5Q91XZ5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhb5Q91XZ5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb5Q91XZ5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb5Q91XZ5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Gm13186-201ENSMUST00000118031 316 ntBASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhb5Q91XZ5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Gm7461-201ENSMUST00000058918 827 ntBASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb5Q91XZ5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms