Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb6Q91XZ4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb6Q91XZ4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Gm7791-201ENSMUST00000219066 539 ntBASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb6Q91XZ4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Gm27000-201ENSMUST00000182943 842 ntBASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb6Q91XZ4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb6Q91XZ4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb6Q91XZ4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb6Q91XZ4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms