Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb8Q91XZ2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb8Q91XZ2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb8Q91XZ2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhb8Q91XZ2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb8Q91XZ2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.71■□□□□ 0.27
Pcdhb8Q91XZ2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb8Q91XZ2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb8Q91XZ2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb8Q91XZ2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb8Q91XZ2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Pcdhb8Q91XZ2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Gm24841-201ENSMUST00000158676 357 ntBASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb8Q91XZ2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Gm13168-201ENSMUST00000121771 632 ntBASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb8Q91XZ2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb8Q91XZ2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb8Q91XZ2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms