Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhga11Q91XY8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga11Q91XY8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Dancr-204ENSMUST00000132389 2347 ntBASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga11Q91XY8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhga11Q91XY8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhga11Q91XY8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.49■□□□□ 0.23
Pcdhga11Q91XY8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga11Q91XY8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhga11Q91XY8 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.48■□□□□ 0.23
Pcdhga11Q91XY8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Pcdhga11Q91XY8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms