Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb4Q91XX6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb4Q91XX6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb4Q91XX6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb4Q91XX6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb4Q91XX6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Gm13168-201ENSMUST00000121771 632 ntBASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Gm20760-201ENSMUST00000179197 648 ntBASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Gm25007-201ENSMUST00000083808 133 ntBASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb4Q91XX6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb4Q91XX6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.06■□□□□ 0.48
Pcdhgb4Q91XX6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb4Q91XX6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms