Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Gm25116-201ENSMUST00000157191 122 ntBASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb17Q91VD8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pcdhb17Q91VD8 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Gm15626-201ENSMUST00000117478 868 ntBASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb17Q91VD8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Gm6433-201ENSMUST00000118634 875 ntBASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb17Q91VD8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb17Q91VD8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb17Q91VD8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Pcdhb17Q91VD8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Gm36943-201ENSMUST00000194422 282 ntBASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb17Q91VD8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms