Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H1fooQ8VIK3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Gm4974-201ENSMUST00000209974 875 ntBASIC14.35□□□□□ -0.11
H1fooQ8VIK3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H1fooQ8VIK3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Gm43183-201ENSMUST00000200632 547 ntBASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H1fooQ8VIK3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H1fooQ8VIK3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H1fooQ8VIK3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H1fooQ8VIK3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H1fooQ8VIK3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
H1fooQ8VIK3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H1fooQ8VIK3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H1fooQ8VIK3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
H1fooQ8VIK3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Gm5643-201ENSMUST00000117081 966 ntBASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Gm10517-202ENSMUST00000192970 758 ntBASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H1fooQ8VIK3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H1fooQ8VIK3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Gm15378-201ENSMUST00000121894 207 ntBASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms