Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40bQ8VHP8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40bQ8VHP8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40bQ8VHP8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40bQ8VHP8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40bQ8VHP8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40bQ8VHP8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40bQ8VHP8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Gm7290-201ENSMUST00000104990 617 ntBASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Gm12918-201ENSMUST00000120234 636 ntBASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Gm15710-201ENSMUST00000121821 636 ntBASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Gm5075-201ENSMUST00000196916 622 ntBASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Rab40bQ8VHP8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40bQ8VHP8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Gm6211-202ENSMUST00000167849 925 ntBASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40bQ8VHP8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms