Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Gm18958-201ENSMUST00000174258 762 ntBASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Gm5587-201ENSMUST00000206270 674 ntBASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr1Q8VHP6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Cdhr1Q8VHP6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdhr1Q8VHP6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdhr1Q8VHP6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdhr1Q8VHP6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Cdhr1Q8VHP6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Gm7284-201ENSMUST00000131667 944 ntBASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Gm10566-201ENSMUST00000086739 996 ntBASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr1Q8VHP6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Gm9013-201ENSMUST00000132939 882 ntBASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr1Q8VHP6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr1Q8VHP6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Gm26039-201ENSMUST00000158152 144 ntBASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cdhr1Q8VHP6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdhr1Q8VHP6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdhr1Q8VHP6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdhr1Q8VHP6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdhr1Q8VHP6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdhr1Q8VHP6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdhr1Q8VHP6 Gm11355-201ENSMUST00000121120 306 ntBASIC16.66■□□□□ 0.26
Cdhr1Q8VHP6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdhr1Q8VHP6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Cdhr1Q8VHP6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms