Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Gm18284-201ENSMUST00000172604 624 ntBASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpa1Q8VEE4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Gm42778-201ENSMUST00000199644 553 ntBASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Rpa1Q8VEE4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Gm10418-201ENSMUST00000100943 576 ntBASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Gm38285-201ENSMUST00000192928 922 ntBASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Gm5874-201ENSMUST00000096101 508 ntBASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpa1Q8VEE4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpa1Q8VEE4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rpa1Q8VEE4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rpa1Q8VEE4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms