Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.57■□□□□ 0.56
Upb1Q8VC97 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.57■□□□□ 0.56
Upb1Q8VC97 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Upb1Q8VC97 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.57■□□□□ 0.56
Upb1Q8VC97 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.56■□□□□ 0.56
Upb1Q8VC97 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Gm10566-201ENSMUST00000086739 996 ntBASIC18.56■□□□□ 0.56
Upb1Q8VC97 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Upb1Q8VC97 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upb1Q8VC97 Gm11355-201ENSMUST00000121120 306 ntBASIC18.55■□□□□ 0.56
Upb1Q8VC97 Gm9013-201ENSMUST00000132939 882 ntBASIC18.55■□□□□ 0.56
Upb1Q8VC97 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
Upb1Q8VC97 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Upb1Q8VC97 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upb1Q8VC97 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upb1Q8VC97 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upb1Q8VC97 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Upb1Q8VC97 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upb1Q8VC97 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upb1Q8VC97 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Gm6345-202ENSMUST00000180900 204 ntBASIC18.54■□□□□ 0.56
Upb1Q8VC97 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.54■□□□□ 0.56
Upb1Q8VC97 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Upb1Q8VC97 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Upb1Q8VC97 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upb1Q8VC97 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.52■□□□□ 0.56
Upb1Q8VC97 Gm5587-201ENSMUST00000206270 674 ntBASIC18.52■□□□□ 0.56
Upb1Q8VC97 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms