Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Gm18666-201ENSMUST00000190039 958 ntBASIC16.4■□□□□ 0.22
Lsm1Q8VC85 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm1Q8VC85 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lsm1Q8VC85 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Lsm1Q8VC85 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Gm24841-201ENSMUST00000158676 357 ntBASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Gm37856-201ENSMUST00000191634 999 ntBASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm1Q8VC85 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm1Q8VC85 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Gm12527-201ENSMUST00000117967 564 ntBASIC16.36■□□□□ 0.21
Lsm1Q8VC85 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Trmt13-210ENSMUST00000198454 880 ntBASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Gm43183-201ENSMUST00000200632 547 ntBASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm1Q8VC85 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms