Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx2ipQ8VC66 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx2ipQ8VC66 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx2ipQ8VC66 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx2ipQ8VC66 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx2ipQ8VC66 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx2ipQ8VC66 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ssx2ipQ8VC66 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ssx2ipQ8VC66 Gm12382-201ENSMUST00000122005 922 ntBASIC17.52■□□□□ 0.4
Ssx2ipQ8VC66 Gm42545-201ENSMUST00000202755 922 ntBASIC17.52■□□□□ 0.4
Ssx2ipQ8VC66 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx2ipQ8VC66 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx2ipQ8VC66 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx2ipQ8VC66 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssx2ipQ8VC66 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssx2ipQ8VC66 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssx2ipQ8VC66 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssx2ipQ8VC66 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms