Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Trmt13-210ENSMUST00000198454 880 ntBASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Gm37292-201ENSMUST00000192062 758 ntBASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps39Q8R5L3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Gm37856-201ENSMUST00000191634 999 ntBASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Vps39Q8R5L3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vps39Q8R5L3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Gm10517-202ENSMUST00000192970 758 ntBASIC17.12■□□□□ 0.33
Vps39Q8R5L3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.12■□□□□ 0.33
Vps39Q8R5L3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps39Q8R5L3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms