Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup58Q8R332 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup58Q8R332 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup58Q8R332 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup58Q8R332 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nup58Q8R332 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup58Q8R332 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.32■□□□□ 0.52
Nup58Q8R332 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nup58Q8R332 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup58Q8R332 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nup58Q8R332 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Nup58Q8R332 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nup58Q8R332 Gm5643-201ENSMUST00000117081 966 ntBASIC18.31■□□□□ 0.52
Nup58Q8R332 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.31■□□□□ 0.52
Nup58Q8R332 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Nup58Q8R332 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup58Q8R332 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Nup58Q8R332 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.3■□□□□ 0.52
Nup58Q8R332 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Nup58Q8R332 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nup58Q8R332 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.3■□□□□ 0.52
Nup58Q8R332 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.3■□□□□ 0.52
Nup58Q8R332 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup58Q8R332 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nup58Q8R332 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.29■□□□□ 0.52
Nup58Q8R332 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.29■□□□□ 0.52
Nup58Q8R332 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nup58Q8R332 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nup58Q8R332 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nup58Q8R332 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup58Q8R332 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nup58Q8R332 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup58Q8R332 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Nup58Q8R332 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.28■□□□□ 0.52
Nup58Q8R332 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup58Q8R332 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Nup58Q8R332 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nup58Q8R332 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup58Q8R332 Gm13216-201ENSMUST00000117145 591 ntBASIC18.28■□□□□ 0.52
Nup58Q8R332 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup58Q8R332 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup58Q8R332 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup58Q8R332 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup58Q8R332 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nup58Q8R332 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup58Q8R332 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup58Q8R332 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.27■□□□□ 0.52
Nup58Q8R332 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup58Q8R332 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.27■□□□□ 0.52
Nup58Q8R332 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup58Q8R332 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup58Q8R332 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup58Q8R332 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms