Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vmn1r28Q8R2C9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Gm9987-201ENSMUST00000069768 567 ntBASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vmn1r28Q8R2C9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vmn1r28Q8R2C9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vmn1r28Q8R2C9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vmn1r28Q8R2C9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
Vmn1r28Q8R2C9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vmn1r28Q8R2C9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Vmn1r28Q8R2C9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vmn1r28Q8R2C9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Gm6433-201ENSMUST00000118634 875 ntBASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.69■□□□□ 0.1
Vmn1r28Q8R2C9 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms