Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp7Q8R1T1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp7Q8R1T1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Gm24589-201ENSMUST00000116692 94 ntBASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp7Q8R1T1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Gm15794-201ENSMUST00000120182 631 ntBASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Gm18115-201ENSMUST00000221209 621 ntBASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Chmp7Q8R1T1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Gm13186-201ENSMUST00000118031 316 ntBASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp7Q8R1T1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp7Q8R1T1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.83■■□□□ 1.08
Chmp7Q8R1T1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp7Q8R1T1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp7Q8R1T1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp7Q8R1T1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Chmp7Q8R1T1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms