Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zcchc9Q8R1J3 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Gm27389-201ENSMUST00000183622 195 ntBASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Gm7370-201ENSMUST00000219471 767 ntBASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Gm21559-201ENSMUST00000220638 855 ntBASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Gm8587-201ENSMUST00000076538 843 ntBASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zcchc9Q8R1J3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Gm29791-202ENSMUST00000207888 369 ntBASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zcchc9Q8R1J3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.03■□□□□ 0.32
Zcchc9Q8R1J3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Tgds-204ENSMUST00000228543 1594 ntBASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zcchc9Q8R1J3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Zcchc9Q8R1J3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Zcchc9Q8R1J3 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms