Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Gm18421-201ENSMUST00000204122 625 ntBASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vopp1Q8R1C3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vopp1Q8R1C3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Gm29707-201ENSMUST00000196325 491 ntBASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.15■□□□□ 0.5
Vopp1Q8R1C3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Vopp1Q8R1C3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Vopp1Q8R1C3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Vopp1Q8R1C3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Vopp1Q8R1C3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vopp1Q8R1C3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.13■□□□□ 0.49
Vopp1Q8R1C3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Vopp1Q8R1C3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Gm7153-201ENSMUST00000117092 455 ntBASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Birc2-201ENSMUST00000054878 378 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms