Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Gm13559-201ENSMUST00000120476 863 ntBASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Gm43799-201ENSMUST00000201845 579 ntBASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a1Q8K4Z5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a1Q8K4Z5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a1Q8K4Z5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a1Q8K4Z5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Sf3a1Q8K4Z5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.89■□□□□ 0.94
Sf3a1Q8K4Z5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Sf3a1Q8K4Z5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sf3a1Q8K4Z5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sf3a1Q8K4Z5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a1Q8K4Z5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms