Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col23a1Q8K4G2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col23a1Q8K4G2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Gm25990-201ENSMUST00000102440 86 ntBASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col23a1Q8K4G2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Gm13418-201ENSMUST00000119097 944 ntBASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Gm7230-201ENSMUST00000173026 815 ntBASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col23a1Q8K4G2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col23a1Q8K4G2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Col23a1Q8K4G2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col23a1Q8K4G2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col23a1Q8K4G2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col23a1Q8K4G2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.77■□□□□ 0.91
Col23a1Q8K4G2 Fst-202ENSMUST00000223640 2612 ntBASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col23a1Q8K4G2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Gm15173-201ENSMUST00000122049 433 ntBASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms